Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
GDNFP39905 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 SLC25A3P1-201ENST00000443844 931 ntBASIC15.2■□□□□ 0.02
GDNFP39905 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.2■□□□□ 0.02
GDNFP39905 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.2■□□□□ 0.02
GDNFP39905 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.2■□□□□ 0.02
GDNFP39905 AC010203.1-204ENST00000548782 407 ntBASIC15.2■□□□□ 0.02
GDNFP39905 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.2■□□□□ 0.02
GDNFP39905 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.2■□□□□ 0.02
GDNFP39905 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.2■□□□□ 0.02
GDNFP39905 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
GDNFP39905 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.2■□□□□ 0.02
GDNFP39905 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.2■□□□□ 0.02
GDNFP39905 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.2■□□□□ 0.02
GDNFP39905 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
GDNFP39905 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
GDNFP39905 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.19■□□□□ 0.02
GDNFP39905 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.19■□□□□ 0.02
GDNFP39905 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 HOXB1-202ENST00000577092 1414 ntBASIC15.19■□□□□ 0.02
GDNFP39905 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
GDNFP39905 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.19■□□□□ 0.02
GDNFP39905 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.19■□□□□ 0.02
GDNFP39905 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.19■□□□□ 0.02
GDNFP39905 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.19■□□□□ 0.02
GDNFP39905 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.19■□□□□ 0.02
GDNFP39905 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
GDNFP39905 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.19■□□□□ 0.02
GDNFP39905 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
GDNFP39905 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GDNFP39905 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.19■□□□□ 0.02
GDNFP39905 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
GDNFP39905 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.19■□□□□ 0.02
GDNFP39905 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.19■□□□□ 0.02
GDNFP39905 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
GDNFP39905 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDNFP39905 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.19■□□□□ 0.02
GDNFP39905 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
GDNFP39905 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
GDNFP39905 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GDNFP39905 AC016396.2-201ENST00000562575 1417 ntBASIC15.18■□□□□ 0.02
GDNFP39905 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GDNFP39905 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GDNFP39905 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.18■□□□□ 0.02
GDNFP39905 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GDNFP39905 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
GDNFP39905 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
GDNFP39905 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 AC211429.1-201ENST00000415277 523 ntBASIC15.18■□□□□ 0.02
GDNFP39905 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.18■□□□□ 0.02
GDNFP39905 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GDNFP39905 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.18■□□□□ 0.02
GDNFP39905 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
GDNFP39905 AC112497.1-201ENST00000624824 639 ntBASIC15.18■□□□□ 0.02
GDNFP39905 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
GDNFP39905 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 AC097493.4-201ENST00000641197 219 ntBASIC15.18■□□□□ 0.02
GDNFP39905 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.18■□□□□ 0.02
GDNFP39905 AC079328.2-201ENST00000561241 3354 ntBASIC15.18■□□□□ 0.02
GDNFP39905 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.18■□□□□ 0.02
GDNFP39905 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
GDNFP39905 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 AC006449.5-201ENST00000610658 2098 ntBASIC15.18■□□□□ 0.02
GDNFP39905 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.18■□□□□ 0.02
GDNFP39905 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.18■□□□□ 0.02
GDNFP39905 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.18■□□□□ 0.02
GDNFP39905 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms