Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLCN1P35523 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN1P35523 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLCN1P35523 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CLCN1P35523 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN1P35523 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CLCN1P35523 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN1P35523 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN1P35523 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.83■□□□□ 0.77
CLCN1P35523 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CLCN1P35523 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CLCN1P35523 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLCN1P35523 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CLCN1P35523 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
CLCN1P35523 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLCN1P35523 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19.83■□□□□ 0.76
CLCN1P35523 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLCN1P35523 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.83■□□□□ 0.76
CLCN1P35523 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLCN1P35523 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLCN1P35523 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLCN1P35523 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCN1P35523 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLCN1P35523 MMP23A-201ENST00000234610 1017 ntBASIC19.82■□□□□ 0.76
CLCN1P35523 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 EGLN1P1-201ENST00000531623 762 ntBASIC19.82■□□□□ 0.76
CLCN1P35523 BX088651.1-201ENST00000540551 451 ntBASIC19.82■□□□□ 0.76
CLCN1P35523 WWOX-216ENST00000569818 525 ntBASIC19.82■□□□□ 0.76
CLCN1P35523 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLCN1P35523 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.82■□□□□ 0.76
CLCN1P35523 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCN1P35523 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCN1P35523 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCN1P35523 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCN1P35523 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN1P35523 AC079328.2-201ENST00000561241 3354 ntBASIC19.81■□□□□ 0.76
CLCN1P35523 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLCN1P35523 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCN1P35523 FAM45BP-202ENST00000592932 1624 ntBASIC19.81■□□□□ 0.76
CLCN1P35523 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCN1P35523 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCN1P35523 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCN1P35523 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CLCN1P35523 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
CLCN1P35523 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCN1P35523 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLCN1P35523 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCN1P35523 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN1P35523 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCN1P35523 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CLCN1P35523 AC093010.1-201ENST00000473625 1624 ntBASIC19.8■□□□□ 0.76
CLCN1P35523 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.8■□□□□ 0.76
CLCN1P35523 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN1P35523 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.8■□□□□ 0.76
CLCN1P35523 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLCN1P35523 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLCN1P35523 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
CLCN1P35523 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.8■□□□□ 0.76
CLCN1P35523 LINC00304-203ENST00000565008 1864 ntBASIC19.8■□□□□ 0.76
CLCN1P35523 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN1P35523 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.8■□□□□ 0.76
CLCN1P35523 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CLCN1P35523 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLCN1P35523 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.8■□□□□ 0.76
CLCN1P35523 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
CLCN1P35523 AP000593.1-201ENST00000393668 712 ntBASIC19.8■□□□□ 0.76
CLCN1P35523 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN1P35523 AC010653.2-201ENST00000623505 997 ntBASIC19.8■□□□□ 0.76
CLCN1P35523 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLCN1P35523 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN1P35523 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.8■□□□□ 0.76
CLCN1P35523 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.8■□□□□ 0.76
CLCN1P35523 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CLCN1P35523 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.8■□□□□ 0.76
CLCN1P35523 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLCN1P35523 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN1P35523 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms