Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.83■□□□□ 0.45
SLC6A4P31645 ZNF259P1-201ENST00000407656 1365 ntBASIC17.83■□□□□ 0.45
SLC6A4P31645 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.83■□□□□ 0.45
SLC6A4P31645 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SLC6A4P31645 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC6A4P31645 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.83■□□□□ 0.44
SLC6A4P31645 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SLC6A4P31645 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC6A4P31645 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC6A4P31645 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC6A4P31645 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 PGM5P2-202ENST00000637225 1043 ntBASIC17.83■□□□□ 0.44
SLC6A4P31645 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC6A4P31645 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SLC6A4P31645 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SLC6A4P31645 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLC6A4P31645 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SLC6A4P31645 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC6A4P31645 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A4P31645 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC6A4P31645 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC6A4P31645 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.82■□□□□ 0.44
SLC6A4P31645 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A4P31645 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC6A4P31645 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 POLD2P1-201ENST00000511220 997 ntBASIC17.82■□□□□ 0.44
SLC6A4P31645 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLC6A4P31645 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC6A4P31645 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC6A4P31645 AL805961.1-202ENST00000641562 540 ntBASIC17.82■□□□□ 0.44
SLC6A4P31645 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SLC6A4P31645 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC6A4P31645 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SLC6A4P31645 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A4P31645 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC6A4P31645 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLC6A4P31645 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC6A4P31645 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC6A4P31645 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC6A4P31645 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 AC090340.1-201ENST00000620778 4980 ntBASIC17.81■□□□□ 0.44
SLC6A4P31645 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC6A4P31645 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC6A4P31645 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SLC6A4P31645 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC6A4P31645 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 PMS2P1-201ENST00000431037 1228 ntBASIC17.81■□□□□ 0.44
SLC6A4P31645 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 AC108751.1-201ENST00000490852 363 ntBASIC17.81■□□□□ 0.44
SLC6A4P31645 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SLC6A4P31645 AC008667.4-201ENST00000607370 168 ntBASIC17.81■□□□□ 0.44
SLC6A4P31645 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC6A4P31645 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC6A4P31645 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SLC6A4P31645 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC6A4P31645 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC6A4P31645 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
SLC6A4P31645 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A4P31645 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A4P31645 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC6A4P31645 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC6A4P31645 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A4P31645 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A4P31645 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms