Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC27P30260 RN7SL510P-201ENST00000581311 263 ntBASIC20.18■□□□□ 0.82
CDC27P30260 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.18■□□□□ 0.82
CDC27P30260 AC064862.7-201ENST00000604520 867 ntBASIC20.18■□□□□ 0.82
CDC27P30260 AL139288.1-201ENST00000623748 933 ntBASIC20.18■□□□□ 0.82
CDC27P30260 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC27P30260 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC27P30260 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC27P30260 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
CDC27P30260 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC27P30260 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC27P30260 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 AC092053.1-201ENST00000605787 1936 ntBASIC20.17■□□□□ 0.82
CDC27P30260 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.17■□□□□ 0.82
CDC27P30260 AC097637.2-201ENST00000624096 1997 ntBASIC20.17■□□□□ 0.82
CDC27P30260 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CDC27P30260 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC27P30260 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.17■□□□□ 0.82
CDC27P30260 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CDC27P30260 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.17■□□□□ 0.82
CDC27P30260 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC27P30260 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.17■□□□□ 0.82
CDC27P30260 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC27P30260 LINC01711-201ENST00000598340 967 ntBASIC20.17■□□□□ 0.82
CDC27P30260 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC27P30260 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.17■□□□□ 0.82
CDC27P30260 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.17■□□□□ 0.82
CDC27P30260 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CDC27P30260 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CDC27P30260 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC27P30260 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC27P30260 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDC27P30260 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC27P30260 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 AC022211.2-201ENST00000585075 2527 ntBASIC20.16■□□□□ 0.82
CDC27P30260 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDC27P30260 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.16■□□□□ 0.82
CDC27P30260 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
CDC27P30260 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC27P30260 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDC27P30260 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.16■□□□□ 0.82
CDC27P30260 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDC27P30260 AC021087.4-201ENST00000563761 564 ntBASIC20.16■□□□□ 0.82
CDC27P30260 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDC27P30260 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDC27P30260 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.16■□□□□ 0.82
CDC27P30260 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CDC27P30260 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC27P30260 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC27P30260 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC27P30260 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC27P30260 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.15■□□□□ 0.82
CDC27P30260 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC27P30260 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.15■□□□□ 0.82
CDC27P30260 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC27P30260 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDC27P30260 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC27P30260 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDC27P30260 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC27P30260 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDC27P30260 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDC27P30260 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.15■□□□□ 0.82
CDC27P30260 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC27P30260 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.15■□□□□ 0.82
CDC27P30260 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.15■□□□□ 0.82
CDC27P30260 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDC27P30260 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDC27P30260 AC025062.2-201ENST00000605477 670 ntBASIC20.15■□□□□ 0.82
CDC27P30260 AL022326.1-202ENST00000641533 845 ntBASIC20.15■□□□□ 0.82
CDC27P30260 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC27P30260 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms