Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN6P29350 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN6P29350 AC019129.2-201ENST00000609837 1235 ntBASIC16.53■□□□□ 0.24
PTPN6P29350 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN6P29350 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PTPN6P29350 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPN6P29350 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PTPN6P29350 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN6P29350 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN6P29350 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PTPN6P29350 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN6P29350 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTPN6P29350 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PTPN6P29350 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN6P29350 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PTPN6P29350 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PTPN6P29350 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.52■□□□□ 0.24
PTPN6P29350 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PTPN6P29350 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PTPN6P29350 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.52■□□□□ 0.24
PTPN6P29350 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
PTPN6P29350 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
PTPN6P29350 MIR3180-1-201ENST00000580374 94 ntBASIC16.52■□□□□ 0.24
PTPN6P29350 AC090616.6-201ENST00000582640 721 ntBASIC16.52■□□□□ 0.24
PTPN6P29350 MIR3180-3-201ENST00000584616 94 ntBASIC16.52■□□□□ 0.24
PTPN6P29350 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.52■□□□□ 0.24
PTPN6P29350 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 AC092119.3-201ENST00000612618 583 ntBASIC16.52■□□□□ 0.24
PTPN6P29350 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN6P29350 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN6P29350 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN6P29350 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN6P29350 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN6P29350 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN6P29350 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PTPN6P29350 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN6P29350 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN6P29350 AC005915.1-201ENST00000624912 2018 ntBASIC16.52■□□□□ 0.23
PTPN6P29350 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTPN6P29350 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTPN6P29350 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PTPN6P29350 AC093525.9-201ENST00000624961 1746 ntBASIC16.51■□□□□ 0.23
PTPN6P29350 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN6P29350 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTPN6P29350 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN6P29350 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN6P29350 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.51■□□□□ 0.23
PTPN6P29350 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTPN6P29350 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTPN6P29350 AP002414.4-201ENST00000589764 1148 ntBASIC16.51■□□□□ 0.23
PTPN6P29350 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.51■□□□□ 0.23
PTPN6P29350 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN6P29350 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTPN6P29350 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PTPN6P29350 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN6P29350 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN6P29350 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTPN6P29350 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
PTPN6P29350 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PTPN6P29350 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms