Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.42■□□□□ 0.7
CTGFP29279 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.42■□□□□ 0.7
CTGFP29279 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
CTGFP29279 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.41■□□□□ 0.7
CTGFP29279 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTGFP29279 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.41■□□□□ 0.7
CTGFP29279 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTGFP29279 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTGFP29279 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.41■□□□□ 0.7
CTGFP29279 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTGFP29279 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.41■□□□□ 0.7
CTGFP29279 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTGFP29279 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.41■□□□□ 0.7
CTGFP29279 SPTLC1P1-201ENST00000447199 261 ntBASIC19.41■□□□□ 0.7
CTGFP29279 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.41■□□□□ 0.7
CTGFP29279 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.41■□□□□ 0.7
CTGFP29279 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.41■□□□□ 0.7
CTGFP29279 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.41■□□□□ 0.7
CTGFP29279 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CTGFP29279 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTGFP29279 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTGFP29279 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTGFP29279 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.41■□□□□ 0.7
CTGFP29279 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.41■□□□□ 0.7
CTGFP29279 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.41■□□□□ 0.7
CTGFP29279 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTGFP29279 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CTGFP29279 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTGFP29279 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTGFP29279 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTGFP29279 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTGFP29279 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTGFP29279 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.4■□□□□ 0.7
CTGFP29279 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.4■□□□□ 0.7
CTGFP29279 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.4■□□□□ 0.7
CTGFP29279 AC109635.5-201ENST00000533593 962 ntBASIC19.4■□□□□ 0.7
CTGFP29279 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.4■□□□□ 0.7
CTGFP29279 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTGFP29279 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.4■□□□□ 0.7
CTGFP29279 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.4■□□□□ 0.7
CTGFP29279 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.4■□□□□ 0.7
CTGFP29279 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTGFP29279 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTGFP29279 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTGFP29279 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CTGFP29279 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTGFP29279 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTGFP29279 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.4■□□□□ 0.7
CTGFP29279 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.39■□□□□ 0.7
CTGFP29279 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.39■□□□□ 0.7
CTGFP29279 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CTGFP29279 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.39■□□□□ 0.69
CTGFP29279 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
CTGFP29279 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CTGFP29279 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CTGFP29279 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CTGFP29279 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTGFP29279 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CTGFP29279 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.39■□□□□ 0.69
CTGFP29279 ATP5G2P4-201ENST00000442175 420 ntBASIC19.39■□□□□ 0.69
CTGFP29279 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 AC027369.6-201ENST00000525520 931 ntBASIC19.39■□□□□ 0.69
CTGFP29279 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.39■□□□□ 0.69
CTGFP29279 AC027307.2-201ENST00000591252 911 ntBASIC19.39■□□□□ 0.69
CTGFP29279 AC009118.2-201ENST00000613275 655 ntBASIC19.39■□□□□ 0.69
CTGFP29279 AC008267.7-201ENST00000624570 1194 ntBASIC19.39■□□□□ 0.69
CTGFP29279 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CTGFP29279 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTGFP29279 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CTGFP29279 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTGFP29279 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.39■□□□□ 0.69
CTGFP29279 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.38■□□□□ 0.69
CTGFP29279 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.38■□□□□ 0.69
CTGFP29279 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTGFP29279 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTGFP29279 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTGFP29279 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CTGFP29279 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.38■□□□□ 0.69
CTGFP29279 WASH6P-202ENST00000359512 1437 ntBASIC19.38■□□□□ 0.69
CTGFP29279 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.38■□□□□ 0.69
CTGFP29279 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTGFP29279 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTGFP29279 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.38■□□□□ 0.69
CTGFP29279 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.38■□□□□ 0.69
CTGFP29279 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.38■□□□□ 0.69
CTGFP29279 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.38■□□□□ 0.69
CTGFP29279 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTGFP29279 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.38■□□□□ 0.69
CTGFP29279 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTGFP29279 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms