Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.72□□□□□ -0.05
COL8A2P25067 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COL8A2P25067 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.71□□□□□ -0.05
COL8A2P25067 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.71□□□□□ -0.05
COL8A2P25067 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
COL8A2P25067 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 REXO1L11P-201ENST00000620964 1927 ntBASIC14.71□□□□□ -0.05
COL8A2P25067 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.71□□□□□ -0.05
COL8A2P25067 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.71□□□□□ -0.05
COL8A2P25067 AC073621.1-201ENST00000392730 636 ntBASIC14.71□□□□□ -0.05
COL8A2P25067 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.71□□□□□ -0.05
COL8A2P25067 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
COL8A2P25067 AC002558.1-201ENST00000488906 803 ntBASIC14.71□□□□□ -0.05
COL8A2P25067 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.71□□□□□ -0.05
COL8A2P25067 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.71□□□□□ -0.05
COL8A2P25067 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.71□□□□□ -0.05
COL8A2P25067 AC034105.1-201ENST00000563488 319 ntBASIC14.71□□□□□ -0.05
COL8A2P25067 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
COL8A2P25067 AC006557.2-201ENST00000592985 1240 ntBASIC14.71□□□□□ -0.05
COL8A2P25067 TERC-201ENST00000602385 541 ntBASIC14.71□□□□□ -0.05
COL8A2P25067 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
COL8A2P25067 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.71□□□□□ -0.05
COL8A2P25067 AC117500.6-201ENST00000624871 588 ntBASIC14.71□□□□□ -0.05
COL8A2P25067 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.71□□□□□ -0.05
COL8A2P25067 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.71□□□□□ -0.05
COL8A2P25067 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
COL8A2P25067 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
COL8A2P25067 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL8A2P25067 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL8A2P25067 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.71□□□□□ -0.06
COL8A2P25067 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
COL8A2P25067 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.71□□□□□ -0.06
COL8A2P25067 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.71□□□□□ -0.06
COL8A2P25067 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL8A2P25067 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COL8A2P25067 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
COL8A2P25067 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COL8A2P25067 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
COL8A2P25067 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.7□□□□□ -0.06
COL8A2P25067 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.7□□□□□ -0.06
COL8A2P25067 AC009336.1-201ENST00000608941 1553 ntBASIC14.7□□□□□ -0.06
COL8A2P25067 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
COL8A2P25067 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.7□□□□□ -0.06
COL8A2P25067 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COL8A2P25067 KRT18P27-201ENST00000427733 1299 ntBASIC14.7□□□□□ -0.06
COL8A2P25067 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.7□□□□□ -0.06
COL8A2P25067 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.7□□□□□ -0.06
COL8A2P25067 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.7□□□□□ -0.06
COL8A2P25067 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
COL8A2P25067 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.7□□□□□ -0.06
COL8A2P25067 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.7□□□□□ -0.06
COL8A2P25067 Z83851.2-201ENST00000609564 659 ntBASIC14.7□□□□□ -0.06
COL8A2P25067 MIR1199-201ENST00000621445 119 ntBASIC14.7□□□□□ -0.06
COL8A2P25067 AC004706.3-202ENST00000621574 984 ntBASIC14.7□□□□□ -0.06
COL8A2P25067 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
COL8A2P25067 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
COL8A2P25067 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
COL8A2P25067 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.7□□□□□ -0.06
COL8A2P25067 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.7□□□□□ -0.06
COL8A2P25067 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
COL8A2P25067 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms