Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 AC009053.2-201ENST00000563701 2365 ntBASIC16.55■□□□□ 0.24
MMP11P24347 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP11P24347 RPS2P1-201ENST00000434010 821 ntBASIC16.55■□□□□ 0.24
MMP11P24347 OR7E14P-202ENST00000530490 1290 ntBASIC16.55■□□□□ 0.24
MMP11P24347 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP11P24347 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 AC025062.2-201ENST00000605477 670 ntBASIC16.55■□□□□ 0.24
MMP11P24347 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP11P24347 AD001527.2-201ENST00000622994 785 ntBASIC16.55■□□□□ 0.24
MMP11P24347 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP11P24347 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
MMP11P24347 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
MMP11P24347 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
MMP11P24347 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP11P24347 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP11P24347 SLC25A1P1-201ENST00000528351 927 ntBASIC16.54■□□□□ 0.24
MMP11P24347 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP11P24347 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP11P24347 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 MTDHP4-201ENST00000600287 670 ntBASIC16.54■□□□□ 0.24
MMP11P24347 AC116407.3-201ENST00000623905 1129 ntBASIC16.54■□□□□ 0.24
MMP11P24347 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 HLA-J-201ENST00000462773 1622 ntBASIC16.54■□□□□ 0.24
MMP11P24347 AC079776.2-201ENST00000641154 1609 ntBASIC16.54■□□□□ 0.24
MMP11P24347 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP11P24347 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP11P24347 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP11P24347 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MMP11P24347 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP11P24347 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MMP11P24347 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP11P24347 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MMP11P24347 PCDHA12-202ENST00000613593 2588 ntBASIC16.53■□□□□ 0.24
MMP11P24347 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP11P24347 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MMP11P24347 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 MIR574-201ENST00000385209 96 ntBASIC16.53■□□□□ 0.24
MMP11P24347 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP11P24347 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 AC106730.1-201ENST00000566722 1090 ntBASIC16.53■□□□□ 0.24
MMP11P24347 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.53■□□□□ 0.24
MMP11P24347 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 AC116407.2-201ENST00000613639 860 ntBASIC16.53■□□□□ 0.24
MMP11P24347 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MMP11P24347 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP11P24347 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms