Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SYN1P17600 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.79■□□□□ 0.6
SYN1P17600 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
SYN1P17600 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYN1P17600 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.79■□□□□ 0.6
SYN1P17600 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYN1P17600 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.78■□□□□ 0.6
SYN1P17600 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.78■□□□□ 0.6
SYN1P17600 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SYN1P17600 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.78■□□□□ 0.6
SYN1P17600 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.78■□□□□ 0.6
SYN1P17600 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SYN1P17600 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.78■□□□□ 0.6
SYN1P17600 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.78■□□□□ 0.6
SYN1P17600 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.78■□□□□ 0.6
SYN1P17600 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SYN1P17600 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.78■□□□□ 0.6
SYN1P17600 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN1P17600 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.78■□□□□ 0.6
SYN1P17600 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SYN1P17600 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SYN1P17600 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
SYN1P17600 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.77■□□□□ 0.6
SYN1P17600 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.77■□□□□ 0.6
SYN1P17600 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.77■□□□□ 0.6
SYN1P17600 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
SYN1P17600 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.77■□□□□ 0.6
SYN1P17600 SLC25A6P5-201ENST00000435663 894 ntBASIC18.77■□□□□ 0.6
SYN1P17600 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.77■□□□□ 0.6
SYN1P17600 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.77■□□□□ 0.6
SYN1P17600 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.77■□□□□ 0.6
SYN1P17600 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.77■□□□□ 0.6
SYN1P17600 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 TP53TG3HP-202ENST00000569755 579 ntBASIC18.77■□□□□ 0.6
SYN1P17600 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.77■□□□□ 0.6
SYN1P17600 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.77■□□□□ 0.6
SYN1P17600 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.77■□□□□ 0.6
SYN1P17600 AC084121.4-201ENST00000641598 221 ntBASIC18.77■□□□□ 0.6
SYN1P17600 AF228730.8-201ENST00000642140 221 ntBASIC18.77■□□□□ 0.6
SYN1P17600 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.77■□□□□ 0.6
SYN1P17600 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SYN1P17600 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.77■□□□□ 0.6
SYN1P17600 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN1P17600 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYN1P17600 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SYN1P17600 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYN1P17600 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYN1P17600 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
SYN1P17600 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 AC126763.1-201ENST00000552015 2118 ntBASIC18.76■□□□□ 0.59
SYN1P17600 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.76■□□□□ 0.59
SYN1P17600 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.76■□□□□ 0.59
SYN1P17600 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.76■□□□□ 0.59
SYN1P17600 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.76■□□□□ 0.59
SYN1P17600 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.76■□□□□ 0.59
SYN1P17600 MIR4515-201ENST00000584082 81 ntBASIC18.76■□□□□ 0.59
SYN1P17600 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SYN1P17600 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SYN1P17600 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN1P17600 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SYN1P17600 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.76■□□□□ 0.59
SYN1P17600 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.76■□□□□ 0.59
SYN1P17600 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms