Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.16■□□□□ 0.18
UBL4AP11441 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
UBL4AP11441 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.15■□□□□ 0.18
UBL4AP11441 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
UBL4AP11441 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
UBL4AP11441 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UBL4AP11441 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
UBL4AP11441 FAM220CP-201ENST00000395253 831 ntBASIC16.15■□□□□ 0.18
UBL4AP11441 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
UBL4AP11441 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.15■□□□□ 0.18
UBL4AP11441 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.15■□□□□ 0.18
UBL4AP11441 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.15■□□□□ 0.18
UBL4AP11441 MINOS1P3-201ENST00000457048 203 ntBASIC16.15■□□□□ 0.18
UBL4AP11441 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.15■□□□□ 0.18
UBL4AP11441 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.15■□□□□ 0.18
UBL4AP11441 NPAP1P7-201ENST00000613027 823 ntBASIC16.15■□□□□ 0.18
UBL4AP11441 AC093458.2-201ENST00000623150 629 ntBASIC16.15■□□□□ 0.18
UBL4AP11441 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.15■□□□□ 0.18
UBL4AP11441 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UBL4AP11441 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.15■□□□□ 0.18
UBL4AP11441 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBL4AP11441 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
UBL4AP11441 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.14■□□□□ 0.17
UBL4AP11441 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
UBL4AP11441 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
UBL4AP11441 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.14■□□□□ 0.17
UBL4AP11441 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.14■□□□□ 0.17
UBL4AP11441 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.14■□□□□ 0.17
UBL4AP11441 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
UBL4AP11441 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
UBL4AP11441 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 ATP5G2P1-201ENST00000433580 426 ntBASIC16.14■□□□□ 0.17
UBL4AP11441 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.14■□□□□ 0.17
UBL4AP11441 KRT17P6-201ENST00000453795 1220 ntBASIC16.14■□□□□ 0.17
UBL4AP11441 AC122714.2-201ENST00000502787 707 ntBASIC16.14■□□□□ 0.17
UBL4AP11441 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.14■□□□□ 0.17
UBL4AP11441 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.14■□□□□ 0.17
UBL4AP11441 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.14■□□□□ 0.17
UBL4AP11441 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
UBL4AP11441 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 AC092119.3-201ENST00000612618 583 ntBASIC16.14■□□□□ 0.17
UBL4AP11441 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.14■□□□□ 0.17
UBL4AP11441 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
UBL4AP11441 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
UBL4AP11441 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
UBL4AP11441 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.14■□□□□ 0.17
UBL4AP11441 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.14■□□□□ 0.17
UBL4AP11441 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.14■□□□□ 0.17
UBL4AP11441 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBL4AP11441 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.14■□□□□ 0.17
UBL4AP11441 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.13■□□□□ 0.17
UBL4AP11441 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.13■□□□□ 0.17
UBL4AP11441 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.13■□□□□ 0.17
UBL4AP11441 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms