Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.82■□□□□ 0.92
POLR3DP05423 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.82■□□□□ 0.92
POLR3DP05423 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.82■□□□□ 0.92
POLR3DP05423 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
POLR3DP05423 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.82■□□□□ 0.92
POLR3DP05423 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
POLR3DP05423 AC002558.1-201ENST00000488906 803 ntBASIC20.82■□□□□ 0.92
POLR3DP05423 RNA5SP415-201ENST00000517246 115 ntBASIC20.82■□□□□ 0.92
POLR3DP05423 KRT18P58-201ENST00000527480 1120 ntBASIC20.82■□□□□ 0.92
POLR3DP05423 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.82■□□□□ 0.92
POLR3DP05423 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.82■□□□□ 0.92
POLR3DP05423 AC006557.2-201ENST00000592985 1240 ntBASIC20.82■□□□□ 0.92
POLR3DP05423 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.82■□□□□ 0.92
POLR3DP05423 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.82■□□□□ 0.92
POLR3DP05423 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
POLR3DP05423 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.82■□□□□ 0.92
POLR3DP05423 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.82■□□□□ 0.92
POLR3DP05423 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR3DP05423 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
POLR3DP05423 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.81■□□□□ 0.92
POLR3DP05423 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.81■□□□□ 0.92
POLR3DP05423 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 AC145285.3-201ENST00000564603 959 ntBASIC20.81■□□□□ 0.92
POLR3DP05423 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 AL356488.2-201ENST00000602755 427 ntBASIC20.81■□□□□ 0.92
POLR3DP05423 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
POLR3DP05423 AL589182.2-201ENST00000619332 1049 ntBASIC20.81■□□□□ 0.92
POLR3DP05423 MIR1199-201ENST00000621445 119 ntBASIC20.81■□□□□ 0.92
POLR3DP05423 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.81■□□□□ 0.92
POLR3DP05423 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.81■□□□□ 0.92
POLR3DP05423 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
POLR3DP05423 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
POLR3DP05423 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR3DP05423 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.8■□□□□ 0.92
POLR3DP05423 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.8■□□□□ 0.92
POLR3DP05423 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
POLR3DP05423 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
POLR3DP05423 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
POLR3DP05423 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.8■□□□□ 0.92
POLR3DP05423 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
POLR3DP05423 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.8■□□□□ 0.92
POLR3DP05423 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.8■□□□□ 0.92
POLR3DP05423 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.8■□□□□ 0.92
POLR3DP05423 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.8■□□□□ 0.92
POLR3DP05423 AC117500.6-201ENST00000624871 588 ntBASIC20.8■□□□□ 0.92
POLR3DP05423 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
POLR3DP05423 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms