Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 AC008687.5-201ENST00000593746 558 ntBASIC15.7■□□□□ 0.1
HLA-DPB1P04440 AL031432.5-201ENST00000641059 760 ntBASIC15.7■□□□□ 0.1
HLA-DPB1P04440 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 AL162727.3-201ENST00000635661 2787 ntBASIC15.7■□□□□ 0.1
HLA-DPB1P04440 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 AL603756.1-201ENST00000606511 2163 ntBASIC15.69■□□□□ 0.1
HLA-DPB1P04440 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 AK4P3-201ENST00000418260 669 ntBASIC15.69■□□□□ 0.1
HLA-DPB1P04440 TMPOP1-202ENST00000424642 1267 ntBASIC15.69■□□□□ 0.1
HLA-DPB1P04440 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 AC104076.2-201ENST00000448912 469 ntBASIC15.69■□□□□ 0.1
HLA-DPB1P04440 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 AL157888.1-201ENST00000631930 593 ntBASIC15.69■□□□□ 0.1
HLA-DPB1P04440 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 FLJ38576-201ENST00000623820 2459 ntBASIC15.69■□□□□ 0.1
HLA-DPB1P04440 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DPB1P04440 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 AC009949.1-201ENST00000623048 1830 ntBASIC15.68■□□□□ 0.1
HLA-DPB1P04440 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 AC008894.3-201ENST00000624324 3103 ntBASIC15.68■□□□□ 0.1
HLA-DPB1P04440 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 DDX43P3-201ENST00000441064 443 ntBASIC15.68■□□□□ 0.1
HLA-DPB1P04440 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 MIR3917-201ENST00000580971 93 ntBASIC15.68■□□□□ 0.1
HLA-DPB1P04440 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 NFIC-211ENST00000641145 8399 ntBASIC15.68■□□□□ 0.1
HLA-DPB1P04440 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DPB1P04440 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms