Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
GGPS1O95749 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.52■□□□□ 0.72
GGPS1O95749 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.52■□□□□ 0.72
GGPS1O95749 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GGPS1O95749 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.52■□□□□ 0.72
GGPS1O95749 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.52■□□□□ 0.72
GGPS1O95749 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.52■□□□□ 0.72
GGPS1O95749 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.52■□□□□ 0.72
GGPS1O95749 AC018845.2-201ENST00000568326 409 ntBASIC19.52■□□□□ 0.72
GGPS1O95749 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.52■□□□□ 0.72
GGPS1O95749 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GGPS1O95749 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.52■□□□□ 0.72
GGPS1O95749 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.52■□□□□ 0.72
GGPS1O95749 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GGPS1O95749 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GGPS1O95749 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.52■□□□□ 0.71
GGPS1O95749 AC008764.6-201ENST00000595909 2069 ntBASIC19.52■□□□□ 0.71
GGPS1O95749 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.51■□□□□ 0.71
GGPS1O95749 AC046185.3-201ENST00000623228 1824 ntBASIC19.51■□□□□ 0.71
GGPS1O95749 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
GGPS1O95749 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 MRPL20P1-201ENST00000400819 433 ntBASIC19.51■□□□□ 0.71
GGPS1O95749 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.51■□□□□ 0.71
GGPS1O95749 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.51■□□□□ 0.71
GGPS1O95749 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.51■□□□□ 0.71
GGPS1O95749 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.51■□□□□ 0.71
GGPS1O95749 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.51■□□□□ 0.71
GGPS1O95749 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
GGPS1O95749 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.51■□□□□ 0.71
GGPS1O95749 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.51■□□□□ 0.71
GGPS1O95749 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GGPS1O95749 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.51■□□□□ 0.71
GGPS1O95749 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.5■□□□□ 0.71
GGPS1O95749 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
GGPS1O95749 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
GGPS1O95749 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
GGPS1O95749 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.5■□□□□ 0.71
GGPS1O95749 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.5■□□□□ 0.71
GGPS1O95749 ACTG1P4-201ENST00000425123 1122 ntBASIC19.5■□□□□ 0.71
GGPS1O95749 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.5■□□□□ 0.71
GGPS1O95749 AC092183.1-201ENST00000469884 875 ntBASIC19.5■□□□□ 0.71
GGPS1O95749 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.5■□□□□ 0.71
GGPS1O95749 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.5■□□□□ 0.71
GGPS1O95749 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.5■□□□□ 0.71
GGPS1O95749 MTDHP5-201ENST00000598980 586 ntBASIC19.5■□□□□ 0.71
GGPS1O95749 BCL2-203ENST00000589955 5011 ntBASIC19.5■□□□□ 0.71
GGPS1O95749 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
GGPS1O95749 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GGPS1O95749 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GGPS1O95749 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
GGPS1O95749 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.49■□□□□ 0.71
GGPS1O95749 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.49■□□□□ 0.71
GGPS1O95749 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.49■□□□□ 0.71
GGPS1O95749 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
GGPS1O95749 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
GGPS1O95749 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GGPS1O95749 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GGPS1O95749 IGLL3P-201ENST00000412472 434 ntBASIC19.49■□□□□ 0.71
GGPS1O95749 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GGPS1O95749 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.49■□□□□ 0.71
GGPS1O95749 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.49■□□□□ 0.71
GGPS1O95749 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.49■□□□□ 0.71
GGPS1O95749 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.49■□□□□ 0.71
GGPS1O95749 AC010654.1-201ENST00000615722 808 ntBASIC19.49■□□□□ 0.71
GGPS1O95749 AC092865.6-201ENST00000642101 219 ntBASIC19.49■□□□□ 0.71
GGPS1O95749 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
GGPS1O95749 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
GGPS1O95749 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GGPS1O95749 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
GGPS1O95749 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.49■□□□□ 0.71
GGPS1O95749 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GGPS1O95749 AL135999.2-201ENST00000622438 1686 ntBASIC19.49■□□□□ 0.71
GGPS1O95749 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GGPS1O95749 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
GGPS1O95749 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
GGPS1O95749 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms