Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 AC005252.3-201ENST00000623855 2258 ntBASIC15.55■□□□□ 0.08
PFDN1O60925 AL359183.1-201ENST00000623796 2132 ntBASIC15.55■□□□□ 0.08
PFDN1O60925 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PFDN1O60925 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PFDN1O60925 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 GMCL1P1-201ENST00000463439 1581 ntBASIC15.55■□□□□ 0.08
PFDN1O60925 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.55■□□□□ 0.08
PFDN1O60925 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.55■□□□□ 0.08
PFDN1O60925 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.55■□□□□ 0.08
PFDN1O60925 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.55■□□□□ 0.08
PFDN1O60925 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.55■□□□□ 0.08
PFDN1O60925 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PFDN1O60925 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PFDN1O60925 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PFDN1O60925 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.55■□□□□ 0.08
PFDN1O60925 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.55■□□□□ 0.08
PFDN1O60925 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.55■□□□□ 0.08
PFDN1O60925 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PFDN1O60925 AC007191.1-201ENST00000623179 2995 ntBASIC15.54■□□□□ 0.08
PFDN1O60925 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.54■□□□□ 0.08
PFDN1O60925 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PFDN1O60925 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PFDN1O60925 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.54■□□□□ 0.08
PFDN1O60925 AC091799.1-201ENST00000422823 811 ntBASIC15.54■□□□□ 0.08
PFDN1O60925 AC097381.1-201ENST00000429019 1296 ntBASIC15.54■□□□□ 0.08
PFDN1O60925 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.54■□□□□ 0.08
PFDN1O60925 AL358852.1-201ENST00000623174 1268 ntBASIC15.54■□□□□ 0.08
PFDN1O60925 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PFDN1O60925 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.54■□□□□ 0.08
PFDN1O60925 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PFDN1O60925 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PFDN1O60925 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PFDN1O60925 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.54■□□□□ 0.08
PFDN1O60925 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.54■□□□□ 0.08
PFDN1O60925 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PFDN1O60925 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.54■□□□□ 0.08
PFDN1O60925 GPAT2P1-201ENST00000444924 1672 ntBASIC15.54■□□□□ 0.08
PFDN1O60925 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.54■□□□□ 0.08
PFDN1O60925 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PFDN1O60925 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PFDN1O60925 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.54■□□□□ 0.08
PFDN1O60925 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
PFDN1O60925 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.53■□□□□ 0.08
PFDN1O60925 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PFDN1O60925 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.53■□□□□ 0.08
PFDN1O60925 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.53■□□□□ 0.08
PFDN1O60925 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PFDN1O60925 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 AC124283.5-201ENST00000624661 1809 ntBASIC15.53■□□□□ 0.08
PFDN1O60925 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.53■□□□□ 0.08
PFDN1O60925 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
PFDN1O60925 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.53■□□□□ 0.08
PFDN1O60925 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms