Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PEX1O43933 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PEX1O43933 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.05■□□□□ 0.32
PEX1O43933 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PEX1O43933 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.04■□□□□ 0.32
PEX1O43933 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PEX1O43933 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PEX1O43933 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.04■□□□□ 0.32
PEX1O43933 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.04■□□□□ 0.32
PEX1O43933 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.04■□□□□ 0.32
PEX1O43933 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PEX1O43933 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.04■□□□□ 0.32
PEX1O43933 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.04■□□□□ 0.32
PEX1O43933 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.04■□□□□ 0.32
PEX1O43933 SEC1P-202ENST00000473944 940 ntBASIC17.04■□□□□ 0.32
PEX1O43933 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.04■□□□□ 0.32
PEX1O43933 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.04■□□□□ 0.32
PEX1O43933 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.04■□□□□ 0.32
PEX1O43933 AC116407.4-201ENST00000623319 1061 ntBASIC17.04■□□□□ 0.32
PEX1O43933 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.04■□□□□ 0.32
PEX1O43933 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.04■□□□□ 0.32
PEX1O43933 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PEX1O43933 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.04■□□□□ 0.32
PEX1O43933 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PEX1O43933 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PEX1O43933 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.03■□□□□ 0.32
PEX1O43933 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.03■□□□□ 0.32
PEX1O43933 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.03■□□□□ 0.32
PEX1O43933 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PEX1O43933 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PEX1O43933 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 KRT18P23-201ENST00000435622 1283 ntBASIC17.03■□□□□ 0.32
PEX1O43933 AC092597.1-201ENST00000487352 616 ntBASIC17.03■□□□□ 0.32
PEX1O43933 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.03■□□□□ 0.32
PEX1O43933 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.03■□□□□ 0.32
PEX1O43933 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PEX1O43933 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PEX1O43933 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PEX1O43933 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
PEX1O43933 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PEX1O43933 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PEX1O43933 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.02■□□□□ 0.32
PEX1O43933 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PEX1O43933 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.02■□□□□ 0.32
PEX1O43933 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.02■□□□□ 0.32
PEX1O43933 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.02■□□□□ 0.32
PEX1O43933 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.02■□□□□ 0.32
PEX1O43933 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.02■□□□□ 0.32
PEX1O43933 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.02■□□□□ 0.32
PEX1O43933 HBZP1-201ENST00000354915 429 ntBASIC17.02■□□□□ 0.32
PEX1O43933 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 MIR564-202ENST00000385049 94 ntBASIC17.02■□□□□ 0.32
PEX1O43933 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PEX1O43933 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.02■□□□□ 0.32
PEX1O43933 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.02■□□□□ 0.32
PEX1O43933 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.02■□□□□ 0.32
PEX1O43933 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PEX1O43933 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.02■□□□□ 0.32
PEX1O43933 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.02■□□□□ 0.32
PEX1O43933 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.02■□□□□ 0.32
PEX1O43933 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms