Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC28A2O43868 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 KRT18P28-201ENST00000453838 1332 ntBASIC16.82■□□□□ 0.28
SLC28A2O43868 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC28A2O43868 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC28A2O43868 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC28A2O43868 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC28A2O43868 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC28A2O43868 AC145285.3-201ENST00000564603 959 ntBASIC16.82■□□□□ 0.28
SLC28A2O43868 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
SLC28A2O43868 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC28A2O43868 AC011840.4-201ENST00000578471 627 ntBASIC16.82■□□□□ 0.28
SLC28A2O43868 MIR5100-201ENST00000579544 119 ntBASIC16.82■□□□□ 0.28
SLC28A2O43868 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SLC28A2O43868 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC28A2O43868 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC28A2O43868 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC28A2O43868 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SLC28A2O43868 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC28A2O43868 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC28A2O43868 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC28A2O43868 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC28A2O43868 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC28A2O43868 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC28A2O43868 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC28A2O43868 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC28A2O43868 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 FAM8A3P-201ENST00000427218 844 ntBASIC16.81■□□□□ 0.28
SLC28A2O43868 METTL21AP1-201ENST00000438852 635 ntBASIC16.81■□□□□ 0.28
SLC28A2O43868 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC28A2O43868 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC28A2O43868 KRT18P3-201ENST00000451602 1288 ntBASIC16.81■□□□□ 0.28
SLC28A2O43868 DUTP2-201ENST00000519164 463 ntBASIC16.81■□□□□ 0.28
SLC28A2O43868 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC28A2O43868 AC040169.1-201ENST00000565382 521 ntBASIC16.81■□□□□ 0.28
SLC28A2O43868 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC28A2O43868 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC28A2O43868 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC28A2O43868 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC28A2O43868 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC28A2O43868 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC28A2O43868 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC28A2O43868 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC28A2O43868 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC28A2O43868 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC28A2O43868 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC28A2O43868 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC28A2O43868 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC28A2O43868 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC28A2O43868 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC28A2O43868 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC28A2O43868 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC28A2O43868 CYMP-203ENST00000474680 1263 ntBASIC16.8■□□□□ 0.28
SLC28A2O43868 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC28A2O43868 AC091607.1-201ENST00000490318 1060 ntBASIC16.8■□□□□ 0.28
SLC28A2O43868 HLA-J-203ENST00000494367 1087 ntBASIC16.8■□□□□ 0.28
SLC28A2O43868 AC096582.2-201ENST00000510860 516 ntBASIC16.8■□□□□ 0.28
SLC28A2O43868 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC28A2O43868 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC28A2O43868 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC28A2O43868 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC28A2O43868 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms