Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF13O43567 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.89■□□□□ 0.13
RNF13O43567 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF13O43567 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 IGHV3-41-201ENST00000613121 348 ntBASIC15.89■□□□□ 0.13
RNF13O43567 AC124864.1-201ENST00000623408 392 ntBASIC15.89■□□□□ 0.13
RNF13O43567 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF13O43567 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RNF13O43567 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF13O43567 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RNF13O43567 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF13O43567 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF13O43567 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF13O43567 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF13O43567 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RNF13O43567 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF13O43567 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF13O43567 NTF6B-201ENST00000591913 560 ntBASIC15.88■□□□□ 0.13
RNF13O43567 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RNF13O43567 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF13O43567 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF13O43567 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF13O43567 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF13O43567 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF13O43567 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF13O43567 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
RNF13O43567 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RNF13O43567 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
RNF13O43567 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
RNF13O43567 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF13O43567 AL031133.1-201ENST00000406807 723 ntBASIC15.87■□□□□ 0.13
RNF13O43567 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.87■□□□□ 0.13
RNF13O43567 FAM210CP-201ENST00000445714 574 ntBASIC15.87■□□□□ 0.13
RNF13O43567 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.87■□□□□ 0.13
RNF13O43567 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF13O43567 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 AC090616.6-201ENST00000582640 721 ntBASIC15.87■□□□□ 0.13
RNF13O43567 AL121956.5-201ENST00000625261 221 ntBASIC15.87■□□□□ 0.13
RNF13O43567 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF13O43567 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RNF13O43567 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF13O43567 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RNF13O43567 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF13O43567 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms