Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 AC046185.3-201ENST00000623228 1824 ntBASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 AC132938.5-201ENST00000624980 1813 ntBASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 NUS1P2-201ENST00000417358 873 ntBASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 AC138894.3-201ENST00000603787 634 ntBASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC162PA2VCL2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 MIR5100-201ENST00000579544 119 ntBASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms