Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
HFM1A2PYH4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HFM1A2PYH4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HFM1A2PYH4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HFM1A2PYH4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
HFM1A2PYH4 ALG1L5P-201ENST00000482043 771 ntBASIC25.53■■□□□ 1.68
HFM1A2PYH4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 CD63-210ENST00000550776 870 ntTSL 5 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 KRT19P2-202ENST00000557173 1012 ntBASIC25.53■■□□□ 1.68
HFM1A2PYH4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC25.53■■□□□ 1.68
HFM1A2PYH4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
HFM1A2PYH4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
HFM1A2PYH4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC25.52■■□□□ 1.68
HFM1A2PYH4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HFM1A2PYH4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
HFM1A2PYH4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
HFM1A2PYH4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HFM1A2PYH4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HFM1A2PYH4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
HFM1A2PYH4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HFM1A2PYH4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
HFM1A2PYH4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
HFM1A2PYH4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
HFM1A2PYH4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
HFM1A2PYH4 AC023274.1-201ENST00000418278 595 ntBASIC25.52■■□□□ 1.68
HFM1A2PYH4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC25.52■■□□□ 1.68
HFM1A2PYH4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
HFM1A2PYH4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
HFM1A2PYH4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
HFM1A2PYH4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HFM1A2PYH4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.68
HFM1A2PYH4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
HFM1A2PYH4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HFM1A2PYH4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HFM1A2PYH4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HFM1A2PYH4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
HFM1A2PYH4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HFM1A2PYH4 FAM185BP-201ENST00000443595 716 ntBASIC25.51■■□□□ 1.67
HFM1A2PYH4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
HFM1A2PYH4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC25.51■■□□□ 1.67
HFM1A2PYH4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC25.51■■□□□ 1.67
HFM1A2PYH4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC25.51■■□□□ 1.67
HFM1A2PYH4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC25.51■■□□□ 1.67
HFM1A2PYH4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC25.51■■□□□ 1.67
HFM1A2PYH4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HFM1A2PYH4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HFM1A2PYH4 LINC02012-201ENST00000608206 1725 ntBASIC25.51■■□□□ 1.67
HFM1A2PYH4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HFM1A2PYH4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
HFM1A2PYH4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
HFM1A2PYH4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
HFM1A2PYH4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HFM1A2PYH4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
HFM1A2PYH4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HFM1A2PYH4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
HFM1A2PYH4 AC129492.6-201ENST00000611383 1305 ntBASIC25.5■■□□□ 1.67
HFM1A2PYH4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HFM1A2PYH4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC25.5■■□□□ 1.67
HFM1A2PYH4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC25.5■■□□□ 1.67
HFM1A2PYH4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HFM1A2PYH4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HFM1A2PYH4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HFM1A2PYH4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HFM1A2PYH4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HFM1A2PYH4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC25.5■■□□□ 1.67
HFM1A2PYH4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC25.5■■□□□ 1.67
HFM1A2PYH4 AC124947.2-201ENST00000547118 1133 ntBASIC25.5■■□□□ 1.67
HFM1A2PYH4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC25.5■■□□□ 1.67
HFM1A2PYH4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HFM1A2PYH4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HFM1A2PYH4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC25.5■■□□□ 1.67
HFM1A2PYH4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC25.5■■□□□ 1.67
HFM1A2PYH4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 RPSAP43-201ENST00000402237 625 ntBASIC25.49■■□□□ 1.67
HFM1A2PYH4 DDT-204ENST00000404092 805 ntTSL 3 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 AC010327.4-202ENST00000591484 748 ntBASIC25.49■■□□□ 1.67
HFM1A2PYH4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms