Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC124947.2-201ENST00000547118 1133 ntBASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC139887.3-201ENST00000568585 713 ntBASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 AL031008.1-201ENST00000619963 541 ntBASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC004706.3-202ENST00000621574 984 ntBASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC107918.4-202ENST00000641623 219 ntBASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 AL590787.1-201ENST00000568856 1315 ntBASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-4A0A0C4DH59 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV5-4A0A0C4DH59 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRBV5-4A0A0C4DH59 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV5-4A0A0C4DH59 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV5-4A0A0C4DH59 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV5-4A0A0C4DH59 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV5-4A0A0C4DH59 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC020916.1-201ENST00000587762 1774 ntBASIC17.08■□□□□ 0.33
TRBV5-4A0A0C4DH59 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 GPR89P-201ENST00000407924 1495 ntBASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 LAGE3P1-201ENST00000425356 484 ntBASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-4A0A0C4DH59 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 KRT18P67-201ENST00000432816 1264 ntBASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 FAM197Y8-203ENST00000450145 560 ntBASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 RNPS1P1-201ENST00000507437 918 ntBASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC073648.2-201ENST00000510116 352 ntBASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms