Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HLA-DRB4X5D2U9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 ARMC10P1-201ENST00000313754 855 ntBASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 TSSC2-201ENST00000450217 709 ntBASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 AL353801.3-201ENST00000609898 542 ntBASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 AC016734.2-201ENST00000624325 1377 ntBASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DRB4X5D2U9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 AC097374.2-201ENST00000618617 1306 ntBASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 LINC01451-201ENST00000623792 534 ntBASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 AL358472.4-201ENST00000633140 710 ntBASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB4X5D2U9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB4X5D2U9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB4X5D2U9 KRT18P1-202ENST00000452408 1331 ntBASIC13.15□□□□□ -0.3
HLA-DRB4X5D2U9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB4X5D2U9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB4X5D2U9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms