Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 KRT17P7-201ENST00000451704 1104 ntBASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 AC087163.2-201ENST00000457299 853 ntBASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTCH2Q9Y6C5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.52■□□□□ 0.71
PTCH2Q9Y6C5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTCH2Q9Y6C5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.52■□□□□ 0.71
PTCH2Q9Y6C5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
PTCH2Q9Y6C5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 U91328.1-201ENST00000437528 223 ntBASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 MIR6799-201ENST00000620297 69 ntBASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 GNAS-203ENST00000306120 1878 ntBASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PTCH2Q9Y6C5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 AC245100.3-201ENST00000441281 285 ntBASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 IGHV3-71-201ENST00000523324 359 ntBASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 AC009118.2-201ENST00000613275 655 ntBASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCH2Q9Y6C5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 AC241585.1-201ENST00000433527 519 ntBASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms