Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 LAGE3P1-201ENST00000425356 484 ntBASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 AC012640.2-201ENST00000561606 901 ntBASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 OR6D1P-202ENST00000641007 5290 ntBASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 AC097637.2-201ENST00000624096 1997 ntBASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 AC139887.3-201ENST00000568585 713 ntBASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 AC005332.8-201ENST00000622750 2735 ntBASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SNX9Q9Y5X1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNX9Q9Y5X1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNX9Q9Y5X1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 AL589182.2-201ENST00000619332 1049 ntBASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 AC008735.5-201ENST00000623544 497 ntBASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 AC243591.1-201ENST00000452967 1364 ntBASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SNX9Q9Y5X1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 FZD10-202ENST00000539839 3282 ntBASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SNX9Q9Y5X1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms