Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 RNPS1P1-201ENST00000507437 918 ntBASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 AC019129.2-201ENST00000609837 1235 ntBASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 AL138688.1-201ENST00000624851 1594 ntBASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 SIRPAP1-201ENST00000448467 1770 ntBASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A3BPQ9Y5P4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 PMPCAP1-201ENST00000508114 1576 ntBASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 MYCLP1-201ENST00000372451 1075 ntBASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 IGHV3-52-201ENST00000519770 353 ntBASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 AP001005.1-201ENST00000571755 1248 ntBASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 AL139288.1-201ENST00000623748 933 ntBASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A3BPQ9Y5P4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 AL031284.1-201ENST00000419297 478 ntBASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 AC021087.4-201ENST00000563761 564 ntBASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 AC109462.3-201ENST00000573934 613 ntBASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 AC108860.2-201ENST00000562760 2183 ntBASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 AL049757.1-201ENST00000616842 1596 ntBASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A3BPQ9Y5P4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 NKAPP1-205ENST00000585790 367 ntBASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms