Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAI2Q9Y5P3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAI2Q9Y5P3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 SPDYE21P-201ENST00000413323 827 ntBASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 FGFR3P6-201ENST00000457012 610 ntBASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 AC009336.1-201ENST00000608941 1553 ntBASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 AC079776.2-201ENST00000641154 1609 ntBASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 FZD10-202ENST00000539839 3282 ntBASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RAI2Q9Y5P3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 AC046185.3-201ENST00000623228 1824 ntBASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 AL020989.1-201ENST00000422979 469 ntBASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI2Q9Y5P3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 AC148477.5-201ENST00000625164 1645 ntBASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 POLD2P1-201ENST00000511220 997 ntBASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 RNA5SP419-201ENST00000515908 135 ntBASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 AP001005.1-201ENST00000571755 1248 ntBASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 AL355385.1-201ENST00000606123 409 ntBASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 AC073592.4-201ENST00000623827 446 ntBASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 AL356309.3-201ENST00000624132 1934 ntBASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 SIGLEC16-201ENST00000599858 1437 ntBASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms