Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 LINC00602-201ENST00000629776 2065 ntBASIC18.81■□□□□ 0.6
USP15Q9Y4E8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP15Q9Y4E8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP15Q9Y4E8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 PCDHA12-202ENST00000613593 2588 ntBASIC18.79■□□□□ 0.6
USP15Q9Y4E8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 SNHG9-202ENST00000564014 471 ntBASIC18.79■□□□□ 0.6
USP15Q9Y4E8 AC005829.1-201ENST00000570002 483 ntBASIC18.79■□□□□ 0.6
USP15Q9Y4E8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 MIR1199-201ENST00000621445 119 ntBASIC18.79■□□□□ 0.6
USP15Q9Y4E8 AP000867.4-201ENST00000641616 219 ntBASIC18.79■□□□□ 0.6
USP15Q9Y4E8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.79■□□□□ 0.6
USP15Q9Y4E8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP15Q9Y4E8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms