Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 AC108751.1-201ENST00000490852 363 ntBASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 AC010327.4-202ENST00000591484 748 ntBASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.76■□□□□ 0.59
SSX2IPQ9Y2D8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 PCDHB18P-201ENST00000524813 2368 ntBASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 AC003669.1-201ENST00000334569 611 ntBASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 AC007967.2-201ENST00000432613 625 ntBASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 SIGLEC30P-201ENST00000455569 941 ntBASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 AC004706.3-202ENST00000621574 984 ntBASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSX2IPQ9Y2D8 NCF1C-201ENST00000438382 1427 ntBASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 AC112482.1-201ENST00000492080 688 ntBASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 AL139424.1-201ENST00000607572 797 ntBASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 NOC2LP1-202ENST00000452600 2235 ntBASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSX2IPQ9Y2D8 AL133373.2-201ENST00000623187 2828 ntBASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 AC064836.3-201ENST00000607928 673 ntBASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 AC055717.3-201ENST00000622967 595 ntBASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.73■□□□□ 0.59
SSX2IPQ9Y2D8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms