Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 LIN28AP1-201ENST00000429574 405 ntBASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 ATP5G1P1-201ENST00000448724 379 ntBASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 AC010203.1-204ENST00000548782 407 ntBASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 CROCCP1-201ENST00000426910 5675 ntBASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 AC005915.1-201ENST00000624912 2018 ntBASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXJ3Q9UPW0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 FAM87A-204ENST00000613235 858 ntBASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 AC073508.3-201ENST00000619697 1419 ntBASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
FOXJ3Q9UPW0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 LINC02012-201ENST00000608206 1725 ntBASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXJ3Q9UPW0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms