Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CDH9Q9ULB4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 RPS15P9-201ENST00000494093 319 ntBASIC18.39■□□□□ 0.53
CDH9Q9ULB4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 AL805961.1-202ENST00000641562 540 ntBASIC18.39■□□□□ 0.53
CDH9Q9ULB4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CDH9Q9ULB4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 MIR574-201ENST00000385209 96 ntBASIC18.38■□□□□ 0.53
CDH9Q9ULB4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.38■□□□□ 0.53
CDH9Q9ULB4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 AC034105.1-201ENST00000563488 319 ntBASIC18.38■□□□□ 0.53
CDH9Q9ULB4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 AC018470.1-201ENST00000624790 3129 ntBASIC18.38■□□□□ 0.53
CDH9Q9ULB4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH9Q9ULB4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 HTR7P1-202ENST00000624664 4411 ntBASIC18.37■□□□□ 0.53
CDH9Q9ULB4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 AC068880.1-201ENST00000507289 2297 ntBASIC18.37■□□□□ 0.53
CDH9Q9ULB4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 PMS2P1-201ENST00000431037 1228 ntBASIC18.37■□□□□ 0.53
CDH9Q9ULB4 AC009947.1-201ENST00000444350 727 ntBASIC18.37■□□□□ 0.53
CDH9Q9ULB4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 AL671883.3-201ENST00000603274 991 ntBASIC18.37■□□□□ 0.53
CDH9Q9ULB4 AC008667.4-201ENST00000607370 168 ntBASIC18.37■□□□□ 0.53
CDH9Q9ULB4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 AL590787.1-201ENST00000568856 1315 ntBASIC18.37■□□□□ 0.53
CDH9Q9ULB4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 AL138688.1-201ENST00000624851 1594 ntBASIC18.37■□□□□ 0.53
CDH9Q9ULB4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH9Q9ULB4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms