Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 DUTP2-201ENST00000519164 463 ntBASIC18.28■□□□□ 0.52
CHD7Q9P2D1 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 RARRES2P8-201ENST00000566335 367 ntBASIC18.28■□□□□ 0.52
CHD7Q9P2D1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 IGHV3-71-201ENST00000523324 359 ntBASIC18.27■□□□□ 0.52
CHD7Q9P2D1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.27■□□□□ 0.52
CHD7Q9P2D1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.27■□□□□ 0.51
CHD7Q9P2D1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.27■□□□□ 0.51
CHD7Q9P2D1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHD7Q9P2D1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHD7Q9P2D1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.27■□□□□ 0.51
CHD7Q9P2D1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.27■□□□□ 0.51
CHD7Q9P2D1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.27■□□□□ 0.51
CHD7Q9P2D1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 MIR6805-201ENST00000615055 62 ntBASIC18.26■□□□□ 0.51
CHD7Q9P2D1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHD7Q9P2D1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 GPR53P-205ENST00000457298 1084 ntBASIC18.25■□□□□ 0.51
CHD7Q9P2D1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 AL020996.1-203ENST00000536896 2307 ntBASIC18.25■□□□□ 0.51
CHD7Q9P2D1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 ACA64.2-201ENST00000459014 129 ntBASIC18.25■□□□□ 0.51
CHD7Q9P2D1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.25■□□□□ 0.51
CHD7Q9P2D1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD7Q9P2D1 UXT-AS1-201ENST00000590504 1525 ntBASIC18.25■□□□□ 0.51
CHD7Q9P2D1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 BX276092.7-203ENST00000637198 1536 ntBASIC18.24■□□□□ 0.51
CHD7Q9P2D1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms