Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CISHQ9NSE2 SART3-203ENST00000546611 1184 ntBASIC18.58■□□□□ 0.56
CISHQ9NSE2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CISHQ9NSE2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.58■□□□□ 0.56
CISHQ9NSE2 AL691432.3-201ENST00000621860 400 ntBASIC18.58■□□□□ 0.56
CISHQ9NSE2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.58■□□□□ 0.56
CISHQ9NSE2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CISHQ9NSE2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CISHQ9NSE2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CISHQ9NSE2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CISHQ9NSE2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CISHQ9NSE2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CISHQ9NSE2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CISHQ9NSE2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CISHQ9NSE2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 PRYP5-201ENST00000451909 266 ntBASIC18.57■□□□□ 0.56
CISHQ9NSE2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.57■□□□□ 0.56
CISHQ9NSE2 AC116353.5-201ENST00000638148 1699 ntBASIC18.57■□□□□ 0.56
CISHQ9NSE2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CISHQ9NSE2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CISHQ9NSE2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CISHQ9NSE2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 SCARNA2-201ENST00000458748 420 ntBASIC18.55■□□□□ 0.56
CISHQ9NSE2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms