Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 AC015922.1-201ENST00000421102 1152 ntBASIC20.26■□□□□ 0.83
EFCC1Q9HA90 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 KRT19P2-202ENST00000557173 1012 ntBASIC20.26■□□□□ 0.83
EFCC1Q9HA90 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 AC148477.5-201ENST00000625164 1645 ntBASIC20.26■□□□□ 0.83
EFCC1Q9HA90 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 AC012313.1-201ENST00000593393 3059 ntBASIC20.25■□□□□ 0.83
EFCC1Q9HA90 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 AL020989.1-201ENST00000422979 469 ntBASIC20.25■□□□□ 0.83
EFCC1Q9HA90 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 AC096734.2-201ENST00000562054 433 ntBASIC20.25■□□□□ 0.83
EFCC1Q9HA90 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 AC010654.1-201ENST00000615722 808 ntBASIC20.25■□□□□ 0.83
EFCC1Q9HA90 AC010507.1-201ENST00000633895 436 ntBASIC20.25■□□□□ 0.83
EFCC1Q9HA90 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 AC132938.5-201ENST00000624980 1813 ntBASIC20.25■□□□□ 0.83
EFCC1Q9HA90 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCC1Q9HA90 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 AC141586.5-201ENST00000624546 2050 ntBASIC20.24■□□□□ 0.83
EFCC1Q9HA90 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 GK-202ENST00000378941 458 ntTSL 3 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 AC004461.1-201ENST00000412461 403 ntBASIC20.24■□□□□ 0.83
EFCC1Q9HA90 AC074386.1-202ENST00000463561 864 ntBASIC20.24■□□□□ 0.83
EFCC1Q9HA90 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 AJ011932.1-201ENST00000621707 465 ntBASIC20.24■□□□□ 0.83
EFCC1Q9HA90 Z92544.3-201ENST00000624747 417 ntBASIC20.24■□□□□ 0.83
EFCC1Q9HA90 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCC1Q9HA90 AL353593.2-201ENST00000602529 1483 ntBASIC20.24■□□□□ 0.83
EFCC1Q9HA90 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 FAM86GP-201ENST00000448322 971 ntBASIC20.23■□□□□ 0.83
EFCC1Q9HA90 RNA5SP421-201ENST00000516864 134 ntBASIC20.23■□□□□ 0.83
EFCC1Q9HA90 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 AL049757.1-201ENST00000616842 1596 ntBASIC20.23■□□□□ 0.83
EFCC1Q9HA90 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCC1Q9HA90 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms