Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXP3Q9BZS1 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXP3Q9BZS1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXP3Q9BZS1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXP3Q9BZS1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXP3Q9BZS1 AC079602.3-201ENST00000623931 403 ntBASIC18.02■□□□□ 0.48
FOXP3Q9BZS1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXP3Q9BZS1 AGGF1P2-201ENST00000426656 2106 ntBASIC18.02■□□□□ 0.47
FOXP3Q9BZS1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FOXP3Q9BZS1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.02■□□□□ 0.47
FOXP3Q9BZS1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXP3Q9BZS1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
FOXP3Q9BZS1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXP3Q9BZS1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXP3Q9BZS1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FOXP3Q9BZS1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 AL121672.3-201ENST00000608644 468 ntBASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 AL139327.4-201ENST00000612362 153 ntBASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 AC016734.2-201ENST00000624325 1377 ntBASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 TNRC18P3-201ENST00000441896 2691 ntBASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXP3Q9BZS1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 AC112698.1-201ENST00000510299 916 ntBASIC18■□□□□ 0.47
FOXP3Q9BZS1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
FOXP3Q9BZS1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXP3Q9BZS1 AC060834.1-201ENST00000443027 2032 ntBASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms