Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF4Q9BSR8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 COX5BP2-201ENST00000392354 334 ntBASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 CHCHD2P8-201ENST00000429873 447 ntBASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 DUSP5P1-201ENST00000441325 1139 ntBASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 AC125634.1-201ENST00000438758 1403 ntBASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 KRT18P1-202ENST00000452408 1331 ntBASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 AC097374.2-201ENST00000618617 1306 ntBASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 AP001094.4-201ENST00000579008 2176 ntBASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
YIPF4Q9BSR8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 AC005104.2-201ENST00000427818 678 ntBASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF4Q9BSR8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms