Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SMOQ99835 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SMOQ99835 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 AC145285.3-201ENST00000564603 959 ntBASIC18.24■□□□□ 0.51
SMOQ99835 AL671883.3-201ENST00000603274 991 ntBASIC18.24■□□□□ 0.51
SMOQ99835 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SMOQ99835 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.24■□□□□ 0.51
SMOQ99835 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SMOQ99835 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMOQ99835 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.23■□□□□ 0.51
SMOQ99835 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SMOQ99835 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SMOQ99835 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SMOQ99835 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.23■□□□□ 0.51
SMOQ99835 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SMOQ99835 PTCHD3P3-201ENST00000403073 906 ntBASIC18.23■□□□□ 0.51
SMOQ99835 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.23■□□□□ 0.51
SMOQ99835 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.23■□□□□ 0.51
SMOQ99835 AC106730.1-201ENST00000566722 1090 ntBASIC18.23■□□□□ 0.51
SMOQ99835 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.23■□□□□ 0.51
SMOQ99835 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.23■□□□□ 0.51
SMOQ99835 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 PP12613-201ENST00000424958 2230 ntBASIC18.23■□□□□ 0.51
SMOQ99835 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.23■□□□□ 0.51
SMOQ99835 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMOQ99835 AC104109.2-201ENST00000602919 1418 ntBASIC18.23■□□□□ 0.51
SMOQ99835 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SMOQ99835 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.23■□□□□ 0.51
SMOQ99835 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.22■□□□□ 0.51
SMOQ99835 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
SMOQ99835 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SMOQ99835 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SMOQ99835 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SMOQ99835 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.22■□□□□ 0.51
SMOQ99835 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.22■□□□□ 0.51
SMOQ99835 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.22■□□□□ 0.51
SMOQ99835 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.22■□□□□ 0.51
SMOQ99835 RPS15P9-201ENST00000494093 319 ntBASIC18.22■□□□□ 0.51
SMOQ99835 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.22■□□□□ 0.51
SMOQ99835 AC034105.1-201ENST00000563488 319 ntBASIC18.22■□□□□ 0.51
SMOQ99835 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.22■□□□□ 0.51
SMOQ99835 AC005593.1-201ENST00000624894 515 ntBASIC18.22■□□□□ 0.51
SMOQ99835 PGM5P2-202ENST00000637225 1043 ntBASIC18.22■□□□□ 0.51
SMOQ99835 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SMOQ99835 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMOQ99835 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SMOQ99835 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.22■□□□□ 0.51
SMOQ99835 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.22■□□□□ 0.51
SMOQ99835 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.22■□□□□ 0.51
SMOQ99835 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMOQ99835 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMOQ99835 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMOQ99835 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 SLC25A1P3-201ENST00000395415 828 ntBASIC18.21■□□□□ 0.51
SMOQ99835 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 AC009947.1-201ENST00000444350 727 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms