Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.44■□□□□ 0.38
CPNE1Q99829 AC122714.2-201ENST00000502787 707 ntBASIC17.44■□□□□ 0.38
CPNE1Q99829 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.44■□□□□ 0.38
CPNE1Q99829 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.44■□□□□ 0.38
CPNE1Q99829 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.44■□□□□ 0.38
CPNE1Q99829 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.44■□□□□ 0.38
CPNE1Q99829 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE1Q99829 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE1Q99829 AC125634.1-201ENST00000438758 1403 ntBASIC17.44■□□□□ 0.38
CPNE1Q99829 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE1Q99829 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE1Q99829 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE1Q99829 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CPNE1Q99829 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE1Q99829 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CPNE1Q99829 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CPNE1Q99829 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CPNE1Q99829 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CPNE1Q99829 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE1Q99829 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CPNE1Q99829 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CPNE1Q99829 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.43■□□□□ 0.38
CPNE1Q99829 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CPNE1Q99829 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.43■□□□□ 0.38
CPNE1Q99829 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CPNE1Q99829 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE1Q99829 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CPNE1Q99829 RN7SL606P-201ENST00000472779 293 ntBASIC17.43■□□□□ 0.38
CPNE1Q99829 AC063952.2-201ENST00000498792 1227 ntBASIC17.43■□□□□ 0.38
CPNE1Q99829 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.43■□□□□ 0.38
CPNE1Q99829 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.43■□□□□ 0.38
CPNE1Q99829 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.43■□□□□ 0.38
CPNE1Q99829 AL353801.3-201ENST00000609898 542 ntBASIC17.43■□□□□ 0.38
CPNE1Q99829 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CPNE1Q99829 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE1Q99829 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.43■□□□□ 0.38
CPNE1Q99829 AC005915.1-201ENST00000624912 2018 ntBASIC17.43■□□□□ 0.38
CPNE1Q99829 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.43■□□□□ 0.38
CPNE1Q99829 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CPNE1Q99829 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE1Q99829 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE1Q99829 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CPNE1Q99829 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE1Q99829 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE1Q99829 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CPNE1Q99829 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CPNE1Q99829 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CPNE1Q99829 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPNE1Q99829 AL645929.1-201ENST00000420084 975 ntBASIC17.42■□□□□ 0.38
CPNE1Q99829 AC103564.2-201ENST00000432853 1299 ntBASIC17.42■□□□□ 0.38
CPNE1Q99829 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.42■□□□□ 0.38
CPNE1Q99829 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.42■□□□□ 0.38
CPNE1Q99829 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE1Q99829 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE1Q99829 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.42■□□□□ 0.38
CPNE1Q99829 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE1Q99829 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE1Q99829 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CPNE1Q99829 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE1Q99829 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms