Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 CCR12P-201ENST00000446203 998 ntBASIC14.17□□□□□ -0.14
RAB40CQ96S21 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 AC046185.3-201ENST00000623228 1824 ntBASIC14.16□□□□□ -0.14
RAB40CQ96S21 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 AL139327.4-201ENST00000612362 153 ntBASIC14.16□□□□□ -0.14
RAB40CQ96S21 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 CICP6-201ENST00000457191 2729 ntBASIC14.16□□□□□ -0.14
RAB40CQ96S21 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40CQ96S21 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40CQ96S21 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 AC026691.1-201ENST00000602502 2017 ntBASIC14.15□□□□□ -0.14
RAB40CQ96S21 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms