Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.76■□□□□ 0.59
ALPK3Q96L96 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.76■□□□□ 0.59
ALPK3Q96L96 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.76■□□□□ 0.59
ALPK3Q96L96 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.76■□□□□ 0.59
ALPK3Q96L96 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 INE1-201ENST00000456273 945 ntBASIC18.75■□□□□ 0.59
ALPK3Q96L96 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALPK3Q96L96 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.75■□□□□ 0.59
ALPK3Q96L96 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 AP006294.1-201ENST00000415407 339 ntBASIC18.74■□□□□ 0.59
ALPK3Q96L96 TMEM14DP-201ENST00000422205 345 ntBASIC18.74■□□□□ 0.59
ALPK3Q96L96 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 HCG4-201ENST00000418983 998 ntBASIC18.74■□□□□ 0.59
ALPK3Q96L96 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.74■□□□□ 0.59
ALPK3Q96L96 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALPK3Q96L96 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms