Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 IGHV3-22-201ENST00000520721 359 ntBASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 AL353135.1-201ENST00000606729 504 ntBASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 AC067852.2-201ENST00000590513 2313 ntBASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 AC006504.4-201ENST00000592118 1568 ntBASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 AL138688.1-201ENST00000624851 1594 ntBASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 AC117500.6-201ENST00000624871 588 ntBASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMARCD1Q96GM5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 SLC25A1P1-201ENST00000528351 927 ntBASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 AC005593.1-201ENST00000624894 515 ntBASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.3■□□□□ 0.52
SMARCD1Q96GM5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 GPR89P-201ENST00000407924 1495 ntBASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms