Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 LTB4R2-202ENST00000528054 3092 ntBASIC15.47■□□□□ 0.07
APH1AQ96BI3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 AC026396.1-201ENST00000419388 421 ntBASIC15.46■□□□□ 0.07
APH1AQ96BI3 KRT18P67-201ENST00000432816 1264 ntBASIC15.46■□□□□ 0.07
APH1AQ96BI3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 AC104692.2-201ENST00000603054 253 ntBASIC15.46■□□□□ 0.07
APH1AQ96BI3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.46■□□□□ 0.07
APH1AQ96BI3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
APH1AQ96BI3 AC068880.1-201ENST00000507289 2297 ntBASIC15.46■□□□□ 0.06
APH1AQ96BI3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
APH1AQ96BI3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
APH1AQ96BI3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.46■□□□□ 0.06
APH1AQ96BI3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 RNPS1P1-201ENST00000507437 918 ntBASIC15.45■□□□□ 0.06
APH1AQ96BI3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 AL662844.1-201ENST00000546340 181 ntBASIC15.45■□□□□ 0.06
APH1AQ96BI3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 AL133373.2-201ENST00000623187 2828 ntBASIC15.45■□□□□ 0.06
APH1AQ96BI3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
APH1AQ96BI3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
APH1AQ96BI3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
APH1AQ96BI3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APH1AQ96BI3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
APH1AQ96BI3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
APH1AQ96BI3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
APH1AQ96BI3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
APH1AQ96BI3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.44■□□□□ 0.06
APH1AQ96BI3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.44■□□□□ 0.06
APH1AQ96BI3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms