Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.35■□□□□ 0.37
ARRDC3Q96B67 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.35■□□□□ 0.37
ARRDC3Q96B67 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARRDC3Q96B67 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARRDC3Q96B67 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARRDC3Q96B67 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARRDC3Q96B67 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.35■□□□□ 0.37
ARRDC3Q96B67 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARRDC3Q96B67 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARRDC3Q96B67 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARRDC3Q96B67 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 MRPL20P1-201ENST00000400819 433 ntBASIC17.34■□□□□ 0.37
ARRDC3Q96B67 MIR1233-2-201ENST00000408138 82 ntBASIC17.34■□□□□ 0.37
ARRDC3Q96B67 MIR1233-1-201ENST00000408722 82 ntBASIC17.34■□□□□ 0.37
ARRDC3Q96B67 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 PRSS29P-201ENST00000440800 595 ntBASIC17.34■□□□□ 0.37
ARRDC3Q96B67 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 AC040169.1-201ENST00000565382 521 ntBASIC17.34■□□□□ 0.37
ARRDC3Q96B67 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 AC007613.1-201ENST00000572811 2597 ntBASIC17.34■□□□□ 0.37
ARRDC3Q96B67 OR7E47P-204ENST00000575924 449 ntBASIC17.34■□□□□ 0.37
ARRDC3Q96B67 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARRDC3Q96B67 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 PI4KAP1-204ENST00000612579 1703 ntBASIC17.33■□□□□ 0.37
ARRDC3Q96B67 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ARRDC3Q96B67 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 IGLL3P-201ENST00000412472 434 ntBASIC17.33■□□□□ 0.36
ARRDC3Q96B67 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 AC018845.2-201ENST00000568326 409 ntBASIC17.33■□□□□ 0.36
ARRDC3Q96B67 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARRDC3Q96B67 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 YBX2P1-201ENST00000394192 760 ntBASIC17.32■□□□□ 0.36
ARRDC3Q96B67 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.32■□□□□ 0.36
ARRDC3Q96B67 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms