Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF34Q969K3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF34Q969K3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RNF34Q969K3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF34Q969K3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF34Q969K3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 AC133963.1-201ENST00000504166 1679 ntBASIC18.26■□□□□ 0.51
RNF34Q969K3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 AC004870.1-201ENST00000315132 882 ntBASIC18.26■□□□□ 0.51
RNF34Q969K3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RNF34Q969K3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF34Q969K3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF34Q969K3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 SAPCD2P3-201ENST00000455031 850 ntBASIC18.26■□□□□ 0.51
RNF34Q969K3 EMBP1-201ENST00000458200 901 ntBASIC18.26■□□□□ 0.51
RNF34Q969K3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF34Q969K3 MTDHP3-201ENST00000594186 672 ntBASIC18.26■□□□□ 0.51
RNF34Q969K3 AP001269.4-201ENST00000609611 512 ntBASIC18.26■□□□□ 0.51
RNF34Q969K3 REXO1L6P-202ENST00000619970 1078 ntBASIC18.26■□□□□ 0.51
RNF34Q969K3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF34Q969K3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF34Q969K3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF34Q969K3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RNF34Q969K3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF34Q969K3 AP005117.1-201ENST00000584346 1413 ntBASIC18.25■□□□□ 0.51
RNF34Q969K3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF34Q969K3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF34Q969K3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF34Q969K3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF34Q969K3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF34Q969K3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.25■□□□□ 0.51
RNF34Q969K3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF34Q969K3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF34Q969K3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF34Q969K3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF34Q969K3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF34Q969K3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF34Q969K3 AC005104.2-201ENST00000427818 678 ntBASIC18.25■□□□□ 0.51
RNF34Q969K3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF34Q969K3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF34Q969K3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.25■□□□□ 0.51
RNF34Q969K3 AC008608.2-201ENST00000606089 416 ntBASIC18.25■□□□□ 0.51
RNF34Q969K3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RNF34Q969K3 AD001527.2-201ENST00000622994 785 ntBASIC18.25■□□□□ 0.51
RNF34Q969K3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF34Q969K3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF34Q969K3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF34Q969K3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF34Q969K3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF34Q969K3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF34Q969K3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF34Q969K3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF34Q969K3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.24■□□□□ 0.51
RNF34Q969K3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF34Q969K3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF34Q969K3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF34Q969K3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF34Q969K3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RNF34Q969K3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
RNF34Q969K3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF34Q969K3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF34Q969K3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RNF34Q969K3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF34Q969K3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF34Q969K3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RNF34Q969K3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF34Q969K3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF34Q969K3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms