Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CNKSR1Q969H4 AC008677.1-201ENST00000519230 1561 ntBASIC21.18■□□□□ 0.98
CNKSR1Q969H4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CNKSR1Q969H4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNKSR1Q969H4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.18■□□□□ 0.98
CNKSR1Q969H4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CNKSR1Q969H4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 IGHV3-42-201ENST00000520410 361 ntBASIC21.17■□□□□ 0.98
CNKSR1Q969H4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 AL390754.1-201ENST00000619088 582 ntBASIC21.17■□□□□ 0.98
CNKSR1Q969H4 AC120498.9-201ENST00000339021 3867 ntBASIC21.17■□□□□ 0.98
CNKSR1Q969H4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.17■□□□□ 0.98
CNKSR1Q969H4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 AC135776.1-201ENST00000319817 2481 ntBASIC21.16■□□□□ 0.98
CNKSR1Q969H4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 AL158211.3-201ENST00000607385 239 ntBASIC21.16■□□□□ 0.98
CNKSR1Q969H4 AC084121.4-201ENST00000641598 221 ntBASIC21.16■□□□□ 0.98
CNKSR1Q969H4 AF228730.8-201ENST00000642140 221 ntBASIC21.16■□□□□ 0.98
CNKSR1Q969H4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.16■□□□□ 0.98
CNKSR1Q969H4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 UXT-AS1-201ENST00000590504 1525 ntBASIC21.15■□□□□ 0.98
CNKSR1Q969H4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 SPDYE14P-201ENST00000442619 822 ntBASIC21.15■□□□□ 0.98
CNKSR1Q969H4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 AL512638.1-201ENST00000457493 794 ntBASIC21.15■□□□□ 0.98
CNKSR1Q969H4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR1Q969H4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNKSR1Q969H4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNKSR1Q969H4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CNKSR1Q969H4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.14■□□□□ 0.98
CNKSR1Q969H4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CNKSR1Q969H4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CNKSR1Q969H4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 HMGA1P7-201ENST00000406908 502 ntBASIC21.14■□□□□ 0.97
CNKSR1Q969H4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR1Q969H4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms