Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 RNF126P1-202ENST00000569893 925 ntBASIC19.68■□□□□ 0.74
SMARCE1Q969G3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCE1Q969G3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 AC092647.4-201ENST00000457211 535 ntBASIC19.67■□□□□ 0.74
SMARCE1Q969G3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCE1Q969G3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 AC010460.3-201ENST00000511359 1579 ntBASIC19.66■□□□□ 0.74
SMARCE1Q969G3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 AC116353.5-201ENST00000638148 1699 ntBASIC19.66■□□□□ 0.74
SMARCE1Q969G3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 AC002558.1-201ENST00000488906 803 ntBASIC19.66■□□□□ 0.74
SMARCE1Q969G3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 FER1L4-210ENST00000615531 5998 ntBASIC19.66■□□□□ 0.74
SMARCE1Q969G3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 AC097374.2-201ENST00000618617 1306 ntBASIC19.66■□□□□ 0.74
SMARCE1Q969G3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCE1Q969G3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms