Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 FLJ13224-201ENST00000313737 1514 ntBASIC16.5■□□□□ 0.23
TM9SF4Q92544 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 HLA-J-201ENST00000462773 1622 ntBASIC16.49■□□□□ 0.23
TM9SF4Q92544 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 MIR1233-2-201ENST00000408138 82 ntBASIC16.49■□□□□ 0.23
TM9SF4Q92544 MIR1233-1-201ENST00000408722 82 ntBASIC16.49■□□□□ 0.23
TM9SF4Q92544 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 MIR7706-201ENST00000613747 67 ntBASIC16.49■□□□□ 0.23
TM9SF4Q92544 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 AC139530.3-201ENST00000620344 690 ntBASIC16.49■□□□□ 0.23
TM9SF4Q92544 AL139288.1-201ENST00000623748 933 ntBASIC16.49■□□□□ 0.23
TM9SF4Q92544 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM9SF4Q92544 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 AL356309.3-201ENST00000624132 1934 ntBASIC16.49■□□□□ 0.23
TM9SF4Q92544 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.49■□□□□ 0.23
TM9SF4Q92544 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TM9SF4Q92544 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM9SF4Q92544 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TM9SF4Q92544 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM9SF4Q92544 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM9SF4Q92544 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM9SF4Q92544 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TM9SF4Q92544 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM9SF4Q92544 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TM9SF4Q92544 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.47■□□□□ 0.23
TM9SF4Q92544 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TM9SF4Q92544 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.47■□□□□ 0.23
TM9SF4Q92544 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM9SF4Q92544 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM9SF4Q92544 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.47■□□□□ 0.23
TM9SF4Q92544 POLD2P1-201ENST00000511220 997 ntBASIC16.47■□□□□ 0.23
TM9SF4Q92544 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TM9SF4Q92544 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.47■□□□□ 0.23
TM9SF4Q92544 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.47■□□□□ 0.23
TM9SF4Q92544 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.47■□□□□ 0.23
TM9SF4Q92544 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms