Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 SLC25A1P1-201ENST00000528351 927 ntBASIC20.49■□□□□ 0.87
STAG1Q8WVM7 AC006557.2-201ENST00000592985 1240 ntBASIC20.49■□□□□ 0.87
STAG1Q8WVM7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.49■□□□□ 0.87
STAG1Q8WVM7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 AC005332.8-201ENST00000622750 2735 ntBASIC20.49■□□□□ 0.87
STAG1Q8WVM7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
STAG1Q8WVM7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 AC073621.1-201ENST00000392730 636 ntBASIC20.48■□□□□ 0.87
STAG1Q8WVM7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 AC116353.5-201ENST00000638148 1699 ntBASIC20.48■□□□□ 0.87
STAG1Q8WVM7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.48■□□□□ 0.87
STAG1Q8WVM7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 AL671883.3-201ENST00000603274 991 ntBASIC20.47■□□□□ 0.87
STAG1Q8WVM7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.47■□□□□ 0.87
STAG1Q8WVM7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 ELK2BP-201ENST00000415014 1224 ntBASIC20.46■□□□□ 0.87
STAG1Q8WVM7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 AC105339.3-201ENST00000560043 636 ntBASIC20.46■□□□□ 0.87
STAG1Q8WVM7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 AC006504.4-201ENST00000592118 1568 ntBASIC20.46■□□□□ 0.87
STAG1Q8WVM7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
STAG1Q8WVM7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
STAG1Q8WVM7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms