Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUP43Q8NFH3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
NUP43Q8NFH3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NUP43Q8NFH3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NUP43Q8NFH3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.33■□□□□ 0.21
NUP43Q8NFH3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 IGHV3-47-201ENST00000425060 335 ntBASIC16.33■□□□□ 0.2
NUP43Q8NFH3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 AC096582.2-201ENST00000510860 516 ntBASIC16.33■□□□□ 0.2
NUP43Q8NFH3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 AC046185.3-201ENST00000623228 1824 ntBASIC16.33■□□□□ 0.2
NUP43Q8NFH3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.33■□□□□ 0.2
NUP43Q8NFH3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 AC104819.1-201ENST00000504587 486 ntBASIC16.32■□□□□ 0.2
NUP43Q8NFH3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 STK25P1-201ENST00000585406 838 ntBASIC16.32■□□□□ 0.2
NUP43Q8NFH3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 BNIP3P18-201ENST00000593976 575 ntBASIC16.32■□□□□ 0.2
NUP43Q8NFH3 AL353593.2-201ENST00000602529 1483 ntBASIC16.32■□□□□ 0.2
NUP43Q8NFH3 AC092119.3-201ENST00000612618 583 ntBASIC16.32■□□□□ 0.2
NUP43Q8NFH3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.32■□□□□ 0.2
NUP43Q8NFH3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUP43Q8NFH3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms