Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 AC018845.2-201ENST00000568326 409 ntBASIC18.15■□□□□ 0.5
LEMD2Q8NC56 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.15■□□□□ 0.5
LEMD2Q8NC56 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LEMD2Q8NC56 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.14■□□□□ 0.5
LEMD2Q8NC56 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LEMD2Q8NC56 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LEMD2Q8NC56 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LEMD2Q8NC56 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
LEMD2Q8NC56 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
LEMD2Q8NC56 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 AP000997.3-201ENST00000623333 2250 ntBASIC18.14■□□□□ 0.49
LEMD2Q8NC56 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 IGLL3P-201ENST00000412472 434 ntBASIC18.14■□□□□ 0.49
LEMD2Q8NC56 HTR5BP-201ENST00000430851 1154 ntBASIC18.14■□□□□ 0.49
LEMD2Q8NC56 RHOQP3-201ENST00000437982 621 ntBASIC18.14■□□□□ 0.49
LEMD2Q8NC56 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 PDPK2P-202ENST00000562415 1191 ntBASIC18.14■□□□□ 0.49
LEMD2Q8NC56 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 AC007064.4-201ENST00000637740 555 ntBASIC18.14■□□□□ 0.49
LEMD2Q8NC56 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LEMD2Q8NC56 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 SNHG9-202ENST00000564014 471 ntBASIC18.13■□□□□ 0.49
LEMD2Q8NC56 MIR4469-201ENST00000583919 79 ntBASIC18.13■□□□□ 0.49
LEMD2Q8NC56 AC010507.1-201ENST00000633895 436 ntBASIC18.13■□□□□ 0.49
LEMD2Q8NC56 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LEMD2Q8NC56 NOC2LP1-202ENST00000452600 2235 ntBASIC18.13■□□□□ 0.49
LEMD2Q8NC56 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
LEMD2Q8NC56 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.12■□□□□ 0.49
LEMD2Q8NC56 PCDHB18P-201ENST00000524813 2368 ntBASIC18.12■□□□□ 0.49
LEMD2Q8NC56 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.12■□□□□ 0.49
LEMD2Q8NC56 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms