Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 AL049757.1-201ENST00000616842 1596 ntBASIC16■□□□□ 0.15
LSMEM1Q8N8F7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 AC016734.2-201ENST00000624325 1377 ntBASIC16■□□□□ 0.15
LSMEM1Q8N8F7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 AC080080.1-201ENST00000625121 2420 ntBASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 AL121761.2-201ENST00000598007 1648 ntBASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 VENTXP7-201ENST00000475503 772 ntBASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 AC009533.2-201ENST00000543664 586 ntBASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 AL590326.2-201ENST00000625139 305 ntBASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LSMEM1Q8N8F7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 AC109462.3-201ENST00000573934 613 ntBASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSMEM1Q8N8F7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms