Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 GPAA1P2-201ENST00000417923 928 ntBASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 AC098850.1-201ENST00000419919 790 ntBASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 AC105233.2-201ENST00000523697 349 ntBASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 AF228730.5-201ENST00000530288 346 ntBASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LTBP4Q8N2S1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 AC093525.8-201ENST00000624099 1342 ntBASIC23.83■■□□□ 1.41
LTBP4Q8N2S1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.83■■□□□ 1.4
LTBP4Q8N2S1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LTBP4Q8N2S1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC23.83■■□□□ 1.4
LTBP4Q8N2S1 AL161938.1-201ENST00000569833 2180 ntBASIC23.83■■□□□ 1.4
LTBP4Q8N2S1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 BRWD1P1-201ENST00000401091 371 ntBASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.82■■□□□ 1.4
LTBP4Q8N2S1 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 AC015936.2-201ENST00000593177 259 ntBASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 RNA5SP412-201ENST00000516234 123 ntBASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 AC073389.1-201ENST00000595595 795 ntBASIC23.81■■□□□ 1.4
LTBP4Q8N2S1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 MYCLP2-201ENST00000449268 967 ntBASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 AL512361.1-201ENST00000554200 418 ntBASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 AC243960.2-201ENST00000600996 747 ntBASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 WFDC1-204ENST00000613603 549 ntBASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.8■■□□□ 1.4
LTBP4Q8N2S1 AL135999.2-201ENST00000622438 1686 ntBASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms